Insertion junction: CLIP2.020669_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020669
Chromosome:chromosome 9
Location:3228817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394732 AZI1,MOT3,CEP131 Centrosomal Protein 131; (1 of 1) K16540 - 5-azacytidine-induced protein 1 (AZI1, CEP131) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCACTGTGGTGTATGCGTGCATGCGTGCGGGATGTTGTTACGGTAAT
Internal bar code:TATGTCCATCCGGCTTTCTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCGCTAACAATGCCACG
Suggested primer 2:AATAGCGCGCTCCTGCTTAT