Insertion junction: CLIP2.020677_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020677
Chromosome:chromosome 3
Location:1114890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148750 CLH1 Chlorophyllase I; (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACCGGCTGCCGAAGTGTTTAGGGTTCAGGCAGGCGTGCCGTGGACA
Internal bar code:CTTGTTCGACAGTATACAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2197
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACGTATCCCAGCAGCGG
Suggested primer 2:GTGTGTGGAGGAAAGCGAGA