Insertion junction: CLIP2.020687_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020687
Chromosome:chromosome 3
Location:3346361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166150 (1 of 1) IPR015077 - Domain of unknown function DUF1858 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCATCGGAGCGGTTGACCATGTCGCCCTGATACCACATGGGAGGAGTA
Internal bar code:GTGTACTCCGGGGCGCCGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTTGTGTTCTTGCTTG
Suggested primer 2:CCCCTCCACTGCTAACACAG