Insertion junction: CLIP2.020692_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020692
Chromosome:chromosome 11
Location:627658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAGGAATGCAGCCGCTGTCACGGCCGCCCGAAACCGTGCCTGGCTTT
Internal bar code:AACTCAATGAGAAAGTTGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCCGATGTGTTTTGCT
Suggested primer 2:AATATCCACAACCCGCAGCA