Insertion junction: CLIP2.020696_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020696
Chromosome:chromosome 4
Location:1843431
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g217950 (1 of 1) PTHR24347//PTHR24349//PTHR24349:SF84 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAACTGAGCTAACAGGCCAGTTATTGTTCAACGGCTTTCAACGAACTC
Internal bar code:AGATCTGCTATCAAGTGTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2502
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGGTGGAGGCATGAGG
Suggested primer 2:CAGCGGCTAGGTACTCTTCG