Insertion junction: CLIP2.020697_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020697
Chromosome:chromosome 2
Location:6850873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTACCTGTAGCCAGAACAGCCGCGCTGGGCTCGTTTTGGCCGGCTTG
Internal bar code:ATGGATGGGCCGTTACGTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCGTCATCGTCTGAGG
Suggested primer 2:GAGCCTTGCAGTCCTGGAAT