Insertion junction: CLIP2.020702_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020702
Chromosome:chromosome 3
Location:775248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146107 5'UTR
Cre03.g146127 FAP96 (1 of 1) PTHR31144:SF1 - UPF0602 PROTEIN C4ORF47; Flagellar Associated Protein 96 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTACTGTGGGCCGCGCTGGAAAGGTGCGGGGTGGCGCACGGAATGGC
Internal bar code:GATGAGTTGAGGGATATATACT

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGTCTTGTTGAAACCC
Suggested primer 2:GTGTGTTCGTGTCACAGTGC