Insertion junction: CLIP2.020703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020703
Chromosome:chromosome 13
Location:3422061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00019060

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACCTCGCCAACCTGCCTGAACCCTGTCCCATCACACACGCACGTCA
Internal bar code:TCGTACTTCGGCTATCACAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4618
LEAP-Seq percent confirming:97.1751
LEAP-Seq n confirming:172
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:177

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCGCGTGTACTAACT
Suggested primer 2:ACCCACCTACCCTAGCTCAG