Insertion junction: CLIP2.020705_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020705
Chromosome:chromosome 17
Location:5631188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740000 (1 of 102) PF01753 - MYND finger (zf-MYND) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTCTAACGCCCGGTTCTCGTAGAGCAGCGCAGCCGCGGCAGCCTCGG
Internal bar code:TGAGCGCGCATGTGTTTTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGGTGGATGTGTTGCGA
Suggested primer 2:TTAGCCCTCACTCCATCCCA