Insertion junction: CLIP2.020706_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020706
Chromosome:chromosome 1
Location:6133980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043550 (1 of 3) IPR000104//IPR004333 - Antifreeze protein, type I // Transcription factor, SBP-box intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGTCATGGTCGCGCGCGCCGACGGCGAACATGCCCCCCAGCAACCCTG
Internal bar code:CGTATTATCGGCGTCGCCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4033
LEAP-Seq percent confirming:97.0149
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCTGTGACCATTTGCGC
Suggested primer 2:AGACAACCAATGCGGCACTA