Insertion junction: CLIP2.020708_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020708
Chromosome:chromosome 10
Location:4902187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453728 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGACAACACACCAGACAGCACACGGGTTACAACAGCACCAGCGCACCT
Internal bar code:AAGAGGTCCTTATGTACTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3329
LEAP-Seq percent confirming:82.9545
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTAGCAAAATTCGGCGG
Suggested primer 2:TCAAAGGGAGGCGACTGTTC