Insertion junction: CLIP2.020714_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020714
Chromosome:chromosome 3
Location:686413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145807 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGGCTGTTGGATTTGGTGCAGCCGCCGGGGGCTGTGGTGGCGCTGC
Internal bar code:CGCGTGTGTATTCGATACAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3555
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGCAGGGCTCTATCTG
Suggested primer 2:GCCTGTTTGATGTGCAGTGG