Insertion junction: CLIP2.020725_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020725
Chromosome:chromosome 10
Location:913801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424100 IPY1 (1 of 1) PTHR10286//PTHR10286:SF3 - INORGANIC PYROPHOSPHATASE // INORGANIC PYROPHOSPHATASE; Inorganic pyrophosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGTCGGGGCGGCGCGCGCGCGGGCGCTCGCCGGTGTGGTGCTGGTGC
Internal bar code:CCGTCTTGGTTTTGTAAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGAGCTTGACGTAGGCC
Suggested primer 2:AGGGCGACAAGGACAAAGAG