Insertion junction: CLIP2.020725_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020725
Chromosome:chromosome 16
Location:4240661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801955 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGTGGAGGCAGCCGCCGTGTCGCTGGCGACGGCGGCAGCAGCAGCGG
Internal bar code:CCCATTTGCAATTTATTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGATGCAGGAGAGGC
Suggested primer 2:AACAGCAGCTACAGCAGGAG