Insertion junction: CLIP2.020728_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020728
Chromosome:plastome
Location:72527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802293 orf202 Wendy transposon 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCATGCTTGCGCTAACGGTCCGCGCAGAAGCTATGAAAAAAGTGGAT
Internal bar code:CGGTATTTAGGGATGGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTTTGTTTGGCCATCCGC
Suggested primer 2:TGACGACGTCAATCAAGCCA