Insertion junction: CLIP2.020729_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020729
Chromosome:chromosome 9
Location:1014390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402350 (1 of 6) IPR000253//IPR008984 - Forkhead-associated (FHA) domain // SMAD/FHA domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACTTGGCACTACGTCCGCCGGGAAGTTGCAAGTGTAGAATGCTAATA
Internal bar code:CCGGAGGTAGGTGTTTCCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4991
LEAP-Seq percent confirming:73.2759
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAAGCCTGTATGCATGC
Suggested primer 2:ACAACCCTTGATGAGCCGAG