Insertion junction: CLIP2.020730_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020730
Chromosome:chromosome 1
Location:6765791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048350 EBM1,CGL53 (1 of 4) K19355 - mannan endo-1,4-beta-mannosidase (MAN); conserved protein with glycosyl hydrolase family 5 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTGTGTGCGTGTGCACAGGACGCACCCTACCTCGCTGTTCTACACGG
Internal bar code:TGGGGTGGGAGACTGAGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3095
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACATCCATCCAAGGTGC
Suggested primer 2:TCGACTGCAAGCAAACATGC