Insertion junction: CLIP2.020746_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020746
Chromosome:chromosome 1
Location:2777740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017050 MCP1 (1 of 22) IPR018108//IPR023395 - Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGGGCTTCCGCGCCACGGGCGACCGCGCGTCGGTGTATGCTAGCCGA
Internal bar code:ATCCCAATTGTCTATAGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:52.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGTCACACCCAATCACA
Suggested primer 2:GGAAGGGGTGTGTTAGTGGG