Insertion junction: CLIP2.020746_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020746
Chromosome:chromosome 1
Location:2777742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017050 MCP1 (1 of 22) IPR018108//IPR023395 - Mitochondrial substrate/solute carrier // Mitochondrial carrier domain; Mitochondrial substrate carrier protein 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCACGGTTGCCCGCCCGGCGACGACTCCCCCGCCAAACAAAGCAACA
Internal bar code:ATCCCAATTGTCTATAGCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1837
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGGGGTGTGTTAGTGGG
Suggested primer 2:CTCCGTCACACCCAATCACA