Insertion junction: CLIP2.020746_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020746
Chromosome:chromosome 12
Location:390876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g495450 3'UTR
Cre12.g495500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGGGCCCAACGCTTTGCCAGTTCACAGCAACCTCCAGCAACGAGTC
Internal bar code:GATCTTTCACCTTGCGGATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1540
LEAP-Seq percent confirming:70.4545
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGCTCACCACCTTGTA
Suggested primer 2:ATGGGTGATGATGCGTTGGA