Insertion junction: CLIP2.020749_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020749
Chromosome:chromosome 13
Location:78477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801505 (1 of 2) PTHR10642//PTHR10642:SF7 - RIBONUCLEASE H1 // SUBFAMILY NOT NAMED CDS
Cre13.g801506 (1 of 2) PTHR10642 - RIBONUCLEASE H1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGCGGGAGCTGAGGCCGGGCCGGCGTCGCCGGCGCCCAACAGCATCA
Internal bar code:CAGACACACGTGTACAGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGGACGTGTTCTGCAT
Suggested primer 2:GACAACCTCTGACCCGCTAG