Insertion junction: CLIP2.020750_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020750
Chromosome:chromosome 3
Location:3849030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170250 PPP12 (1 of 2) PTHR13832//PTHR13832:SF267 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 1K, MITOCHONDRIAL; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAGACAGGGCAGCAGTTGCCCTTCTTCCGCAGCTTCTGCATCTGCATA
Internal bar code:GCAGGAGCGAACGTTGAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACTTGCACATCCCCTT
Suggested primer 2:ATTATCAGACCTGCTCGCGG