Insertion junction: CLIP2.020754_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020754
Chromosome:chromosome 8
Location:4030656
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382650 UBQ4 (1 of 2) K09313 - homeobox protein cut-like (CUTL); Bi-ubiquitin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGAAGGTAGCATGGCGAGAAACAGAAGGCGAAGGTAGCACGGTGAGA
Internal bar code:GTCCATAAAGGGGGTATGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGCACGAGTTGACCAT
Suggested primer 2:CACACACACACACAACCGTC