Insertion junction: CLIP2.020765_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020765
Chromosome:chromosome 2
Location:4001301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTCTGTGTGCTGAGCATGTATGCGTGTGTATTCCACTGCCTGCTGC
Internal bar code:GGGATTCGAGTCTGTAGTGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3056
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTCATGATCCGACA
Suggested primer 2:AAAGATGGCTCAAGGCGTGA