Insertion junction: CLIP2.020766_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020766
Chromosome:chromosome 7
Location:4497894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343567 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGTCACCAGCTCGTGCTTGAGGCCAGCATCCCGGCTGTTGTTCACA
Internal bar code:GGTGAGAGGTCCGTCGCATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4446
LEAP-Seq percent confirming:77.0642
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGCACTGTTGACGTGA
Suggested primer 2:ATCCTGGCTTGACACAGTGG