Insertion junction: CLIP2.020779_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020779
Chromosome:chromosome 7
Location:4885349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346418 (1 of 2) PTHR13271//PTHR13271:SF30 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCACCGCCACCACATGCAGATCCTGCTGGACAAGGGCGCCGTGCTGG
Internal bar code:CGATTGTCGACAGATGTCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGATCCCACTCCTCCTC
Suggested primer 2:GATTCGCACTGCCGTACAAC