Insertion junction: CLIP2.020780_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020780
Chromosome:chromosome 13
Location:2632007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581050 GT90F46,GT90-46 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 46 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAAAACACAAAGCTGAAGATAGGCTGAGGCGCACATGAACGCACATC
Internal bar code:TATAACGGAATCTCCCTAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2398
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGGTGGGTTGTCTGCCT
Suggested primer 2:AGCTGCTCAATGAAGGGGTC