Insertion junction: CLIP2.020784_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020784
Chromosome:chromosome 9
Location:512946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748797 (1 of 1) PTHR32026:SF10 - PROTEIN Y39F10A.3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACTCTGCAGAGGTCCGGGGGAGTCTCGGCCTCTCGTGGTTTTGGGCAC
Internal bar code:GCTCACAAGCTGATATGTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGTGCAAACACCCTTG
Suggested primer 2:GCCACTCTACATACTCCGGC