Insertion junction: CLIP2.020792_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020792
Chromosome:chromosome 9
Location:5327897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407550 (1 of 1) IPR000104//IPR003034 - Antifreeze protein, type I // SAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCGGCTTCAACTCCTGCACCCGCTGTCGCGGCTGCGGCTGCAGCTGC
Internal bar code:CCGTACCAGCCTATTATTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1929
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTTCAAGAGCGTCTCAG
Suggested primer 2:TTATGTCGGGCTTGACCACC