Insertion junction: CLIP2.020797_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020797
Chromosome:chromosome 1
Location:3103297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019750 (1 of 1) PTHR10871:SF4 - DNA TOPOISOMERASE 6 SUBUNIT B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCTTACCAATGTCCCATAGCACAACCAAAACCCAACAAGGACGCAGC
Internal bar code:TCGTCGTAGAAAAATCGAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAAGCACAGGTGGAGAG
Suggested primer 2:GATTGTGTGGGTGGGGTAGG