Insertion junction: CLIP2.020798_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020798
Chromosome:chromosome 3
Location:7304922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206950 (1 of 1) PF05183 - RNA dependent RNA polymerase (RdRP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGCATGCACTCTCAATTCATCTGTCCTGTTTGCCGCCGCCACCAAT
Internal bar code:GAGATTGCGATCCCGAGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4410
LEAP-Seq percent confirming:70.1923
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATGGGGCAACAGGGATG
Suggested primer 2:TCCACGTCATCACCACACAG