Insertion junction: CLIP2.020800_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020800
Chromosome:chromosome 2
Location:4947032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110250 PCD2 Polyketide cyclase/dehydrase; (1 of 2) PTHR24078//PTHR24078:SF290 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACACACGAACTGTCTCGGTCACAGACACTGCTGACGTGCTCGCCGGG
Internal bar code:TACGTCGTGTAATGTCTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3227
LEAP-Seq percent confirming:81.1321
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:106

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATTCTGTCGGTCAGCAG
Suggested primer 2:GTCCACCGTGTACGTGTTCT