Insertion junction: CLIP2.020802_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020802
Chromosome:chromosome 7
Location:472735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315550 (1 of 2) IPR005654//IPR027417 - ATPase, AFG1-like // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCAGCAGTTGTCCACGTGCGAAATGACGTCGACCGGCTGTCAGACGC
Internal bar code:GGGCGTAGGGCTGCGAAGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2268
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTGCAAACAACAGGCGA
Suggested primer 2:GTGTGGTCCGGTAGAACAGG