Insertion junction: CLIP2.020811_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020811
Chromosome:chromosome 3
Location:3885989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170601 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATCTTCGCCTCGGCCTCCTGCTTCTGCCGCTGCAGCTCATCCTTCT
Internal bar code:TTGATAGGTCATCGGACGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3992
LEAP-Seq percent confirming:98.3871
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACTTTCCTACCTGCCCC
Suggested primer 2:AAGAAAGGGGAGTTGCAGGG