Insertion junction: CLIP2.020813_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020813
Chromosome:chromosome 17
Location:3941076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTACAGTAGGCATTGCGGGCACCATATCATCGGTAGCCATCCCCCTA
Internal bar code:GCTCGTGGAAGTACTATAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTTTGTGTATGCGTGC
Suggested primer 2:ACGCGCCTCATATCCTCAAG