Insertion junction: CLIP2.020821_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020821
Chromosome:chromosome 12
Location:7741514
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g554600 CGL146 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGACGCAATGACGGGAAGAGCCCAAAAGCCTCAGGGCAGGCCAAATGG
Internal bar code:GAACGTGGTAGCTGGGGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACAGGGTTTTCGTGG
Suggested primer 2:AAGACACGAGCTGGACGAAG