Insertion junction: CLIP2.020822_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020822
Chromosome:chromosome 12
Location:2335370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508100 (1 of 2) PTHR21580//PTHR21580:SF21 - SHIPPO-1-RELATED // O(6)-METHYLGUANINE-INDUCED APOPTOSIS 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACGCGGCGCCGTCACTGGCGGCGGATGCGCCGGGCCCTGGCGAGTAC
Internal bar code:TACGCTAGTAAATATGAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGAAGAGGAGGGAGGAG
Suggested primer 2:CATGCTGTTCTGCGTCGATG