Insertion junction: CLIP2.020825_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020825
Chromosome:chromosome 11
Location:3663139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478456 (1 of 45) IPR029052 - Metallo-dependent phosphatase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAATCGCCTGCGCTTACTCCCTGCGGTGCCCTCCCTCGCCACCTCCC
Internal bar code:GTCAGACATTGAGCGCCGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGACTGTGTTGCAAGC
Suggested primer 2:GCGGATGAGTGTGCGAATTC