Insertion junction: CLIP2.020835_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020835
Chromosome:chromosome 9
Location:2219387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395200 (1 of 1) PF04087 - Domain of unknown function (DUF389) (DUF389) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGGTGTGGCCTGGCGTGGAGTGGTGTGGGGTGGGGATTACGGCAGC
Internal bar code:CGGCTAAATCTATAGGATGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCGTTATGTTGGCCATC
Suggested primer 2:TCTTGCATCCTCTCCCCTCA