Insertion junction: CLIP2.020839_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020839
Chromosome:chromosome 2
Location:5826099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00041141

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCAACTGTGCGTTAGGGCTGTGGGTCAACTCCATGCAAACTGCTTGC
Internal bar code:AGGGGGGGTCATTAATTTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4163
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTGTACGGTACCACGG
Suggested primer 2:AGTCAGGAACACGTGCAGAG