Insertion junction: CLIP2.020842_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020842
Chromosome:chromosome 3
Location:362173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144687 (1 of 2) PTHR12983:SF9 - RING FINGER PROTEIN 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCGGGGTGATGAAACTACGTATGGAGGGTTGTGATTTTGCTGTCGC
Internal bar code:TAGAAATGGCGAGTCTCGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3403
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCACAAAGTTCCAATGCA
Suggested primer 2:CACCAAAATGGGATTCGCCG