Insertion junction: CLIP2.020845_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020845
Chromosome:chromosome 12
Location:9656543
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558353 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGAAGACACAGATGTCCGCGGATGGCCAAATGGTCGCAGCCGACGGA
Internal bar code:CTCTATTAACCCTTCCAAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGACGGCTGTAGCATCG
Suggested primer 2:GTTGATGAGACAGGTGGGGG