Insertion junction: CLIP2.020851_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020851
Chromosome:chromosome 13
Location:2152320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577650 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGTGGCTGCGGAAGTGGGTTGCCAGGGTGCGGCTGAGCAGGCGCAG
Internal bar code:TCTTACTGGGTGATACCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:9.67742
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACACGGCTTTGAAAGTT
Suggested primer 2:AACTCGCCCGTGTAACAGTT