Insertion junction: CLIP2.020852_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020852
Chromosome:chromosome 3
Location:8367219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800397 (1 of 1) K18735 - protein SMG9 (SMG9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCATGCATAAGGCGGCTCCGGAGAGCCCTGTTGCGCAAGAGCAGATG
Internal bar code:GCAATGGTCCGTGGAATACCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:25.5814
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGAGTGGTCCGTATGG
Suggested primer 2:CAACAAAACGGGGAGCTGTG