Insertion junction: CLIP2.020855_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020855
Chromosome:chromosome 7
Location:2345672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328226 (1 of 6) IPR000817 - Prion protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTCCTGCATCCGGGCCGCCGCCGTGCGTGCCCAGCGGGAGGTTACGG
Internal bar code:TTCCAGATAAACAATATTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTCACGCGATGAACAC
Suggested primer 2:CCCTTCGTGGCATAGTGTGT