Insertion junction: CLIP2.020871_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020871
Chromosome:chromosome 3
Location:4001437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171650 HEL16 (1 of 2) PTHR18934:SF145 - ATP-DEPENDENT RNA HELICASE DHX57-RELATED; DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGCACAGCGCCTGGCGGGGCGAGGGGGCAGGGCAGGAGAAGGAGCG
Internal bar code:GCGCTGTTTCTTAACCGACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCTGTGTGTGTGTGTGC
Suggested primer 2:GGTTGTGTGCGTGTGTGTAC