Insertion junction: CLIP2.020873_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020873
Chromosome:chromosome 13
Location:762865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566750 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGTGTTCTTGCGCTGACCGCTGCATCCCCCGACGAACCCAGCACACT
Internal bar code:CAAGTGATTTGGTATGGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCACCTGTTCCACGTTA
Suggested primer 2:CACGCATGCTACGTCTTTCG