Insertion junction: CLIP2.020884_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020884
Chromosome:chromosome 16
Location:6689706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTGTGGCGAGCGCGCTTACGGAGACGGTCAGTGCCGCACTATGGGCG
Internal bar code:GTGGCCTGCAGTGGGGGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2218
LEAP-Seq percent confirming:91.0714
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAATGTCATGGGTTCCGG
Suggested primer 2:AACACACAAGGCTCCACACA