Insertion junction: CLIP2.020885_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020885
Chromosome:chromosome 11
Location:1896109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACTAAATCGATGTGTGCATGTGTGTTATGTGTGCATTGCCGAGGCACT
Internal bar code:TGCAGGGGAATGTAGAACCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1312
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCCCTCCGCTAGTTCA
Suggested primer 2:GAGCGGGGGTCTATGTCATG