Insertion junction: CLIP2.020885_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020885
Chromosome:chromosome 11
Location:1896114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467785 (1 of 3) PTHR10625:SF102 - HISTONE DEACETYLASE 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGGGCATAAGTGCCAGTTCTGTGCATGCTCACGCGTACAGGAGCTCG
Internal bar code:CATGTCGGTATGAACTGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1413
LEAP-Seq percent confirming:21.0084
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:94
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGGGGTCTATGTCATG
Suggested primer 2:TCCTTCCCTCCGCTAGTTCA